Vladimir Boža

Meno: Vladimír Boža odborný assistent Email: bozafmph.uniba.sk Miestnosť: M-25 Adresa: Vladimír Boža Katedra aplikovanej informatiky FMFI UK Mlynská dolina 824 48 Bratislava

Výučba

• Strojové učenie (2-INF-150)
• Moderné techniky strojového učenia (2-INF-188)

Výskum

• pattern matching
• bioinformatics

Publikácie

• Boža V, Perešíni P, Brejová B, Vinař T. DeepNano-blitz: a fast base caller for MinION nanopore sequencers. Bioinformatics. 2020;36(14):4191-4192. doi:10.1093/bioinformatics/btaa297
• Boža, Vladimír, Broňa Brejová, and Tomáš Vinař. "DeepNano: deep recurrent neural networks for base calling in MinION nanopore reads." PloS one 12.6 (2017): e0178751.
• Boža, Vladimír, et al. "Fishing in Read Collections: Memory Efficient Indexing for Sequence Assembly." International Symposium on String Processing and Information Retrieval. Springer, Cham, 2015.
• Boža, Vladimír, Broňa Brejová, and Tomáš Vinař. "GAML: Genome Assembly by Maximum Likelihood." Algorithms in Bioinformatics. Springer Berlin Heidelberg, 2014. 122-134.
• Kvapilova, Lucia, et al. "Continuous sound collection using smartphones and machine learning to measure cough." Digital biomarkers 3.3 (2019): 166-175.
• Boža, Vladimír, Broňa Brejová, and Tomáš Vinař. "Improving Nanopore Reads Raw Signal Alignment." arXiv preprint arXiv:1705.01620 (2017).
• Bodova, Katarina, et al. "Time-adjusted analysis shows weak associations between BCG vaccination policy and COVID-19 disease progression." medRxiv (2020).
• Boža, Vladimír. "Experimental Comparison of Set Intersection Algorithms for Inverted Indexing." (2013).